Publications of C Widmer

Heinrich, S.; Geissen, E.-M.; Kamenz, J.; Trautmann, S.; Widmer, C.; Drewe, P.; Knop, M.; Radde, N.; Hasenauer, J.; Hauf, S.: Determinants of robustness in spindle assembly checkpoint signalling. Nature Cell Biology 15 (11), pp. 1328 - 1339 (2013)

Spencer, W.; Zeller, G.; Watson, J.; Henz, S.; Watkins, K.; McWhirter, R.; Petersen, S.; Sreedharan, V.; Widmer, C.; Jo, J. et al.; Reinke, V.; Petrella, L.; Strohme, S.; Von Stetina, S.; Katz, M.; Shaham, S.; Rätsch, G.; Miller, D.: A spatial and temporal map of C. elegans gene expression. Genome Research 21 (2), pp. 325 - 341 (2011)

Sonnenburg, S.; Rätsch, G.; Henschel, S.; Widmer, C.; Behr, J.; Zien, A.; De Bona, F.; Binder, A.; Gehl, C.; Franc, V.: The SHOGUN Machine Learning Toolbox. Journal of Machine Learning Research 11, pp. 1799 - 1802 (2010)

Zeller, G.; Henz, S.; Widmer, C.; Sachsenberg, T.; Rätsch, G.; Weigel, D.; Laubinger, S.: Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays. The Plant Journal 58 (6), pp. 1068 - 1082 (2009)

Laubinger, S.; Zeller, G.; Henz, S.; Sachsenberg, T.; Widmer, C.; Widmer, C.; Naouar, N.; Vuylsteke, M.; Schölkopf, B.; Rätsch, G. et al.; Weigel, D.: At-TAX: A Whole Genome Tiling Array Resource for Developmental Expression Analysis and Transcript Identification in Arabidopsis thaliana. Genome Biology 9 (7), R112 (2008)

Widmer, C.; Kloft, M.; Görnitz, N.; Rätsch, G.: Efficient Training of Graph-Regularized Multitask SVMs. In: Machine Learning and Knowledge Discovery in Databases European Conference, ECML PKDD 2012, pp. 633 - 647 (Eds. Flach, P.; De Bie, T.; Cristianini, N.). European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases (ECML PKDD 2012), Bristol, UK, September 24, 2012 - September 28, 2012. Springer, Berlin, Germany (2012)

Widmer, C.; Rätsch, G.: Multitask Learning in Computational Biology. In: ICML 2011 Unsupervised and Transfer Learning Workshop, pp. 207 - 216 (Eds. Silver, D.; Guyon, I.; Taylor, G.; Dror, G.; Lemaire, V.). ICML 2011 Unsupervised and Transfer Learning Workshop, Bellevue, WA, USA, July 02, 2011. Curran, Red Hook, NY, USA (2012)

Toussaint, N.; Widmer, C.; Kohlbacher, O.; Rätsch, G.: Exploiting physico-chemical properties in string kernels. NIPS Workshop on Machine Learning in Computational Biology (MLCB 2019), Whistler, BC, Canada, December 10, 2009 - December 11, 2009. BMC Bioinformatics 11 (Supplement 8), S7, (2010)

Widmer, C.; Toussaint, N.; Altun, Y.; Rätsch, G.: Inferring latent task structure for Multitask Learning by Multiple Kernel Learning. NIPS Workshop on Machine Learning in Computational Biology (MLCB 2019), Whistler, BC, Canada, December 10, 2009 - December 11, 2009. BMC Bioinformatics 11 (Supplement 8), S5, (2010)

Widmer, C.; Toussaint, N.; Altun, Y.; Kohlbacher, O.; Rätsch, G.: Novel Machine Learning Methods for MHC Class I Binding Prediction. In: PRIB 2010: Pattern Recognition in Bioinformatics, pp. 98 - 109 (Eds. Dijkstra, T.; Tsivtsivadze, E.; Marchiori, E.; Heskes, T.). 5th IAPR International Conference on Pattern Recognition in Bioinformatics (PRIB 2010), Nijmegen, The Netherlands, September 22, 2010 - September 24, 2010. Springer, Berlin, Germany (2010)

Widmer, C.; Leiva, J.; Altun, Y.; Rätsch, G.: Leveraging Sequence Classification by Taxonomy-Based Multitask Learning. In: RECOMB 2010: Research in Computational Molecular Biology, pp. 522 - 534 (Ed. Berger, B.). 14th International Conference on Research in Computational Molecular Biology (RECOMB 2010), Lisboa, Portugal, April 25, 2010 - April 28, 2010. Springer, Berlin, Germany (2010)

Schweikert, G.; Widmer, C.; Schölkopf, B.; Rätsch, G.: An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis. In: Advances in neural information processing systems 21, pp. 1433 - 1440 (Eds. Koller, D.; Schuurmans, D.; Bengio, Y.; Bottou, L.). Twenty-Second Annual Conference on Neural Information Processing Systems (NIPS 2008), Vancouver, BC, Canada, December 08, 2008 - December 10, 2008. Curran, Red Hook, NY, USA (2009)

Heinrich, S.; Geissen, E.-M.; Trautmann, S.; Kamenz, J.; Widmer, C.; Drewe, P.; Knop, N.; Radde, N.; Hasenauer, J.; Hauf, S.: Determinants for robustness in spindle assembly checkpoint signaling. 52nd Annual Meeting of the American Society for Cell Biology (ASCB 2013), New Orleans, LA, USA (2013)