Publikationen von P Drewe

Dubin, M.; Zhang, P.; Meng, D.; Remigereau, M.-S.; Osborne, E.; Casale, F.; Drewe, P.; Kahles, A.; Jean, G.; Vilhjálmsson, B. et al.; Jagoda, J.; Irez, S.; Voronin, V.; Song, Q.; Long, Q.; Rätsch, G.; Stegle, O.; Clark, R.; Nordborg, M.: DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation. eLife 4, e05255 (2015)

Sreedharan, V.; Schultheiss, S.; Jean, G.; Kahles, A.; Bohnert, R.; Drewe, P.; Mudrakarta, P.; Görnitz, N.; Zeller, G.; Rätsch, G.: Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis. Bioinformatics 30 (9), S. 1300 - 1301 (2014)

Heinrich, S.; Geissen, E.-M.; Kamenz, J.; Trautmann, S.; Widmer, C.; Drewe, P.; Knop, M.; Radde, N.; Hasenauer, J.; Hauf, S.: Determinants of robustness in spindle assembly checkpoint signalling. Nature Cell Biology 15 (11), S. 1328 - 1339 (2013)

Behr, J.; Kahles, A.; Zhong, Y.; Sreedharan, V.; Drewe, P.; Rätsch, G.: MITIE: Simultaneous RNA-Seq-based transcript identification and quantification in multiple samples. Bioinformatics 29 (20), S. 2529 - 2538 (2013)

Smith, L.; Hartmann, L.; Drewe, P.; Bohnert, R.; Kahles, A.; Lanz, C.; Rätsch, G.: Multiple insert size paired-end sequencing for deconvolution of complex transcriptomes. RNA Biology 9 (5), S. 596 - 609 (2012)

Gan, X.; Stegle, O.; Behr, J.; Steffen, J.; Drewe, P.; Hildebrand, K.; Lyngsoe , R.; Schultheiss, S.; Osborne, E.; Sreedharan, V. et al.; Kahles, A.; Bohnert, R.; Jean, G.; Derwent, P.; Kersey, P.; Belfield, E.; Harberd, N.; Kemen, F.; Toomajian, C.; Kover , P.; Clark, R.; Rätsch, G.; Mott, R.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477 (7365), S. 419 - 423 (2011)

Stegle, O.; Drewe, P.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. Nature Precedings 2010 (2010)

Schultheiss, S.; Jean, G.; Behr, J.; Bohnert, R.; Drewe, P.; Görnitz, N.; Kahles, A.; Mudrakarta, P.; Sreedharan, V.; Zeller, G. et al.; Rätsch, G.: Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data. In BMC Bioinformatics, 12 (Supplement 11), A7. Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011, Wien, Austria, 15. Juli 2011. BioMed Central (2011)

Gan, X.; Behr, J.; Steffen, J.; Hildebrand, K.; Allchin, L.; Goodstadt, L.; Stegle, O.; Drewe, P.; Lyngsoe, R.; Sreedharan, V. et al.; Osborne, E.; Toomajian, C.; Kover, P.; Rätsch, G.; Clark, R.; Mott, R.: Accurate Sequencing of 18 Genomes of Arabidopsis thaliana and Its Use in Imputing the Genome Sequences of Over 600 MAGIC Recombinant Inbred Lines. In 22nd International Conference on Arabidopsis Research (ICAR 2011), 22, S. 78. 22nd International Conference on Arabidopsis Research (ICAR 2011), Madison, WI, USA, 22. Juni 2011 - 25. Juni 2011. (2011)

Heinrich, S.; Geissen, E.-M.; Trautmann, S.; Kamenz, J.; Widmer, C.; Drewe, P.; Knop, N.; Radde, N.; Hasenauer, J.; Hauf, S.: Determinants for robustness in spindle assembly checkpoint signaling. 52nd Annual Meeting of the American Society for Cell Biology (ASCB 2013), New Orleans, LA, USA (2013)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria (2011)

Drewe, P.; Stegle, O.; Behr, J.; Clark, R.; Rätsch, G.; Mott, R.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. 4th Berlin Summer Meeting: “Computational & Experimental Molecular Biology Meet”, Berlin, Germany (2011)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical tests for detecting differential RNA-transcript expression. 4th Berlin Summer Meeting: “Computational & Experimental Molecular Biology Meet”, Berlin, Germany (2011)

Steffen, J.; Behr, J.; Drewe, P.; Hillebrand, K.; Kover, P.; Lyngsoe, R.; Mott, R.; Osborne, E.; Rätsch, G.; Schultheiss, S. et al.; Sreedharan, V.; Stegle, O.; Toomajin, C.; Xiangchao, G.; Clark, R.: Extensive Genomic and Transcriptomic Variation in the 19 Founders of the Arabidopsis MAGIC Lines. 22nd International Conference on Arabidopsis Research (ICAR 2011), Madison, WI, USA (2011)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)