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paramfiles
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ARTS: Accurate Recognition of Transcription Starts in Human
RASE: Recognition of alternatively Spliced Exons
Large Scale Genomic Sequence SVM Classifiers
Large Scale Multiple Kernel Learning
Large scale Hidden Semi-Markov SVMs
gcbtutorial
mGene: A Novel Discriminative Gene Finding System
An automated combination of kernels for protein subcellular localization
Margin-based Prediction of Polymorphic Regions
A General and Efficient Multiple Kernel Learning Algorithm
New Methods for Splice Site Recognition
Accurate Splice Site Detection in C. elegans
Accurate Splice Site Detection (Supplementary Material)
Shogun
Learning Interpretable SVMs for biological Sequence Analysis
PALMA: mRNA to Genome Alignments using Large Margin Algorithms
paramfiles
Bioinformatics Data
Bootstrapping the Alternative Splicing Annotation of Newly Sequenced Genomes
mSplicer
Transcript Normalization and Segmentation of Tiling Array Data
POIM
Optimal Spliced Alignments of Short Sequence Reads
Easysvm
RNA Secondary Structure Prediction using Large Margin Methods
KIRMES: Kernel-based Identification of Regulatory Modules in Euchromatic Sequences
Tutorial on Support Vector Machines and Kernels for Computational Biology
genomedomainadaptation
rQuant: Quantitative Detection of Alternative Transcripts with RNA-Seq Data
GenomeMapper-QPALMA
srm-eval
Info
paramfiles
Title
Type
arabidopsis-ath1-ss1-il1.param.bz2
File
human-micro-hg17-ss1-il1.param.bz2
File
human-hg17-ss1-il1.param.bz2
File
elegans-micro-WS150-ss1-il1.param.bz2
File
elegans-micro-WS150-ss1-il0.param.bz2
File
elegans-micro-WS150-ss0-il1.param.bz2
File
elegans-micro-WS150-ss0-il0.param.bz2
File
elegans-WS150-ss1-il1.param.bz2
File
elegans-WS150-ss1-il0.param.bz2
File
elegans-WS150-ss0-il1.param.bz2
File
elegans-WS150-ss0-il0.param.bz2
File
drosophila-dm5-ss1-il1.param.bz2
File
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News
Paper on taxonomy-based transfer learning for Sequence classification of has been accepted for RECOMB 2010
Dec 15, 2009
Paper on Genome-wide SNP variation analysis in rice published in PNAS.
Jul 14, 2009
New release of the spliced-alignment tool QPALMA
Jul 13, 2009
Postdoctoral position available
Jun 24, 2009
Paper on a novel Support Vector Machine-based Gene Finding System has been accepted for publication in Genome Research
Jun 23, 2009
Web-based Gene finding system mGene.web available and published in Nucleic Acids Research
Jun 03, 2009
Paper on Optimized Cutting Plane Algorithm accepted by Journal of Machine Learning Research
Jun 01, 2009
The Scientists writes about QPALMA in the current issue
Jun 01, 2009
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What's New?
gcbtutorial
Paper on taxonomy-based transfer learning for Sequence classification of has been accepted for RECOMB 2010